2025
(2025) RNA polymerase II transcription compartments — from factories to condensates, Nature Reviews Genetics 2025, p. 1-14, Nature Publishing Group, url, doi:10.1038/s41576-025-00859-6
(2025) Mechanisms of Enhancer-Mediated Gene Activation in the Context of the 3D Genome, Annual review of genomics and human genetics, Annu Rev Genomics Hum Genet, url, doi:10.1146/ANNUREV-GENOM-120423-012301
(2025) Mechanisms of Enhancer-Mediated Gene Activation in the Context of the 3D Genome, Annual Review of Genomics and Human Genetics, Annual Reviews, url, doi:10.1146/ANNUREV-GENOM-120423-012301
(2025) CTCF depletion decouples enhancer-mediated gene activation from chromatin hub formation, Nature Structural & Molecular Biology 2025, p. 1-14, Nature Publishing Group, url, doi:10.1038/s41594-025-01555-z
(2025) Non-monotonous Concentration Dependent Solvation of ATP Could Help to Rationalize Its Anomalous Impact on Various Biophysical Processes, Journal of Physical Chemistry Letters 16, p. 4305-4314, American Chemical Society, url, doi:10.1021/ACS.JPCLETT.5C00338/ASSET/IMAGES/LARGE/JZ5C00338_0006.JPEG
(2025) The chloroplast RNA–binding protein CP29A supports rbcL expression during cold acclimation, Proceedings of the National Academy of Sciences of the United States of America 122(5), p. e2403969122, National Academy of Sciences, url, doi:10.1073/PNAS.2403969122/SUPPL_FILE/PNAS.2403969122.SAPP.PDF
(2025) Enhanced Electrical Performance and Stretchability by Plasticizer-Facilitated PEDOT:PSS Self-Alignment, Advanced Science, p. 2502853, John Wiley and Sons Inc, url, doi:10.1002/ADVS.202502853;WGROUP:STRING:PUBLICATION
(2025) Excitability and oscillations of active droplets, url
(2025) Assembly of tight junction belts by ZO1 surface condensation and local actin polymerization, Developmental Cell 60(8), p. 1234-1250.e6, Elsevier, url, doi:10.1016/J.DEVCEL.2024.12.012
(2025) Theory of non-dilute binding and surface phase separation applied to membrane-binding proteins, bioRxiv, p. 2024.12.31.630850, Cold Spring Harbor Laboratory, url, doi:10.1101/2024.12.31.630850
2024
(2024) Senescent cells cluster CTCF on nuclear speckles to sustain their splicing program, bioRxiv, p. 2024.07.16.603680, Cold Spring Harbor Laboratory, url, doi:10.1101/2024.07.16.603680
(2024) Transcription processes compete with loop extrusion to homogenize promoter and enhancer dynamics, Science advances 10(50), p. eadq0987, American Association for the Advancement of Science, url, doi:10.1126/SCIADV.ADQ0987/SUPPL_FILE/SCIADV.ADQ0987_DATA_S1_TO_S3.ZIP
(2024) HP1 binding creates a local barrier against transcription activation and persists during chromatin decondensation, bioRxiv, p. 2024.12.09.627308, Cold Spring Harbor Laboratory, url, doi:10.1101/2024.12.09.627308
(2024) Cell stress and phase separation stabilize the monomeric state of pseudoisocyanine chloride employed as a self-assembly crowding sensor, Communications Chemistry 2024 7:1 7(1), p. 1-8, Nature Publishing Group, url, doi:10.1038/s42004-024-01315-y
(2024) A prion-like domain is required for phase separation and chloroplast RNA processing during cold acclimation in Arabidopsis, The Plant Cell 36(8), p. 2851-2872, Oxford Academic, url, doi:10.1093/PLCELL/KOAE145
(2024) Biomolecular condensates mediate bending and scission of endosome membranes, Nature 2024 634:8036 634(8036), p. 1204-1210, Nature Publishing Group, url, doi:10.1038/s41586-024-07990-0
(2024) Protein-Specific Crowding Accelerates Aging in Protein Condensates, Biomacromolecules, American Chemical Society, url, doi:10.1021/ACS.BIOMAC.4C00609/ASSET/IMAGES/LARGE/BM4C00609_0005.JPEG
(2024) Accessible high-speed image-activated cell sorting, Trends in Cell Biology 34(8), p. 657-670, Elsevier Current Trends, url, doi:10.1016/J.TCB.2024.04.007
(2024) A liquid-like coat mediates chromosome clustering during mitotic exit, Molecular Cell 84(17), p. 3254-3270.e9, Cell Press, url, doi:10.1016/J.MOLCEL.2024.07.022
(2024) Optical characterization of molecular interaction strength in protein condensates, Molecular Biology of the Cell 35(12), Jeffrey Woodruff (ed.), p. ar154, url, doi:10.1091/MBC.E24-03-0128
(2024) The interplay between biomolecular assembly and phase separation, eLife 13, eLife Sciences Publications Limited, url, doi:10.7554/ELIFE.93003.2
(2024) Protein-Specific Crowding Accelerates Aging in Protein Condensates, Biomacromolecules, American Chemical Society, url, doi:10.1021/ACS.BIOMAC.4C00609
2023
(2023) Approaches to characterize chromatin subcompartment organization in the cell nucleus, Current Opinion in Structural Biology 83, Elsevier Ltd, url, doi:10.1016/j.sbi.2023.102695
(2023) Assessing the Phase Separation Propensity of Proteins in Living Cells Through Optodroplet Formation, Methods in Molecular Biology 2563, p. 395-411, Humana Press Inc., url, doi:10.1007/978-1-0716-2663-4_20,
(2023) CAG-Repeat RNA Hairpin Folding and Recruitment to Nuclear Speckles with a Pivotal Role of ATP as a Cosolute, Journal of the American Chemical Society 145(17), p. 9571-9583, American Chemical Society, url, doi:10.1021/JACS.2C13653/ASSET/IMAGES/LARGE/JA2C13653_0007.JPEG
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(2023) Copper drives prion protein phase separation and modulates aggregation, Science Advances 9(44), American Association for the Advancement of Science, url, doi:10.1126/SCIADV.ADI7347
(2023) Genetically encoded multimeric tags for subcellular protein localization in cryo-EM, Nature Methods 2023, p. 1-9, Nature Publishing Group, url, doi:10.1038/s41592-023-02053-0
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(2023) Biomolecular condensation involving the cytoskeleton, Brain research bulletin 194, Brain Res Bull, url, doi:10.1016/J.BRAINRESBULL.2023.01.009
(2023) Initiation and modulation of Tau protein phase separation by the drug suramin, Scientific reports 13(1), p. 3963, Sci Rep, url, doi:10.1038/S41598-023-29846-9
(2023) The endoplasmic reticulum puts a new spin on synaptic tagging, Trends in Neurosciences 46(1), p. 32-44, Elsevier Current Trends, doi:10.1016/J.TINS.2022.10.012
(2023) Light Microscopy and Dynamic Light Scattering to Study Liquid-Liquid Phase Separation of Tau Proteins In Vitro, Methods in Molecular Biology 2551, p. 225-243, Humana Press Inc., url, doi:10.1007/978-1-0716-2597-2_15/FIGURES/4
2022
(2022) DNA sequence-dependent formation of heterochromatin nanodomains, Nature Communications 2022 13:1 13(1), p. 1-13, Nature Publishing Group, url, doi:10.1038/s41467-022-29360-y
(2022) Functional organization of RNA polymerase II in nuclear subcompartments, Current Opinion in Cell Biology 74, p. 88-96, Elsevier Ltd, url, doi:10.1016/j.ceb.2022.01.005
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(2022) Superoxide Dismutase 1 Folding Stability as a Target for Molecular Tweezers in SOD1-Related Amyotrophic Lateral Sclerosis, ChemBioChem 23(21), p. e202200396, John Wiley and Sons Inc, url, doi:10.1002/CBIC.202200396;WEBSITE:WEBSITE:CHEMISTRY-EUROPE;REQUESTEDJOURNAL:JOURNAL:14397633;WGROUP:STRING:PUBLICATION
(2022) High-speed fluorescence image-enabled cell sorting, Science 375(6578), p. 315-320, American Association for the Advancement of Science, url, doi:10.1126/SCIENCE.ABJ3013/SUPPL_FILE/SCIENCE.ABJ3013_MDAR_REPRODUCIBILITY_CHECKLIST.PDF
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2021
(2021) RNA polymerase II transcription compartments: from multivalent chromatin binding to liquid droplet formation?, Nature Reviews Molecular Cell Biology 22(10), p. 645-646, Nature Research, url, doi:10.1038/S41580-021-00401-6;SUBJMETA=337,386,572,631,80;KWRD=NUCLEAR+ORGANIZATION,TRANSCRIPTION
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(2021) Local thermodynamics govern formation and dissolution of Caenorhabditis elegans P granule condensates, Proceedings of the National Academy of Sciences of the United States of America 118(37), p. e2102772118, National Academy of Sciences, url, doi:10.1073/PNAS.2102772118/SUPPL_FILE/PNAS.2102772118.SM01.MP4
(2021) Local thermodynamics govern formation and dissolution of Caenorhabditis elegans P granule condensates, Proceedings of the National Academy of Sciences of the United States of America 118(37), p. e2102772118, National Academy of Sciences, url, doi:10.1073/PNAS.2102772118/SUPPL_FILE/PNAS.2102772118.SM01.MP4
(2021) Sequestration of Proteins in Stress Granules Relies on the In-Cell but Not the in Vitro Folding Stability, Journal of the American Chemical Society 143(47), p. 19909-19918, American Chemical Society, url, doi:10.1021/JACS.1C09589/SUPPL_FILE/JA1C09589_SI_001.PDF
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(2021) Tau and Membranes: Interactions That Promote Folding and Condensation, Frontiers in Cell and Developmental Biology 9, Front Cell Dev Biol, url, doi:10.3389/fcell.2021.725241
(2021) Disease-Associated Tau Phosphorylation Hinders Tubulin Assembly within Tau Condensates, Angewandte Chemie - International Edition 60(2), p. 726-730, John Wiley & Sons, Ltd, url, doi:10.1002/anie.202011157
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(2021) Stress-induced nuclear condensation of NELF drives transcriptional downregulation, Molecular Cell 81(5), p. 1013-1026.e11, Mol Cell, url, doi:10.1016/j.molcel.2021.01.016
(2021) Role of Solvent Compatibility in the Phase Behavior of Binary Solutions of Weakly Associating Multivalent Polymers, Biomacromolecules 15, p. acs.biomac.1c01301, American Chemical Society, url, doi:10.1021/ACS.BIOMAC.1C01301
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(2021) The hierarchical packing of euchromatin domains can be described as multiplicative cascades, PLoS Computational Biology 17(5), p. e1008974, Public Library of Science, url, doi:10.1371/journal.pcbi.1008974
(2021) Disease-linked TDP-43 hyperphosphorylation suppresses TDP-43 condensation and aggregation, bioRxiv, p. 2021.04.30.442163, Cold Spring Harbor Laboratory, url, doi:10.1101/2021.04.30.442163
2020
(2020) Phase separation provides a mechanism to reduce noise in cells, Science 367(6476), p. 464-468, American Association for the Advancement of Science, url, doi:10.1126/SCIENCE.AAV6691/SUPPL_FILE/AAV6691S2.MOV
(2020) Microfluidic characterization of macromolecular liquid-liquid phase separation, Lab on a Chip 20(22), p. 4225-4234, The Royal Society of Chemistry, url, doi:10.1039/d0lc00613k
(2020) Chromosome clustering by Ki-67 excludes cytoplasm during nuclear assembly, Nature 2020 587:7833 587(7833), p. 285-290, Nature Publishing Group, url, doi:10.1038/s41586-020-2672-3
(2020) Mechanisms for Active Regulation of Biomolecular Condensates, Trends in Cell Biology 30(1), p. 4-14, Elsevier, url, doi:10.1016/j.tcb.2019.10.006
(2020) Biomolecular condensation of the microtubule-associated protein tau, Seminars in Cell & Developmental Biology 99, p. 202-214, Academic Press, doi:10.1016/J.SEMCDB.2019.06.007
(2020) The liquid state of FG-nucleoporins mimics permeability barrier properties of nuclear pore complexes, Journal of Cell Biology 219(1), Rockefeller University Press, url, doi:10.1083/jcb.201907157
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(2020) A High-Throughput Screen for Transcription Activation Domains Reveals Their Sequence Features and Permits Prediction by Deep Learning, Molecular Cell 78(5), p. 890-902.e6, Cell Press, doi:10.1016/j.molcel.2020.04.020
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(2020) Repetitive RNAs as Regulators of Chromatin-Associated Subcompartment Formation by Phase Separation, Journal of Molecular Biology 432(15), p. 4270-4286, Academic Press, doi:10.1016/j.jmb.2020.04.015
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(2020) A Quantitative Assay to Measure Stress Granule Association of Proteins and Peptides in Semi-permeabilized Human Cells, BIO-PROTOCOL 10(24), p. e3846, Bio Protoc, url, doi:10.21769/bioprotoc.3846
2019
(2019) Lysine/RNA-interactions drive and regulate biomolecular condensation, Nature Communications 10(1), p. 1-15, Nature Publishing Group, url, doi:10.1038/s41467-019-10792-y
(2019) The synergic effect of water and biomolecules in intracellular phase separation, Nature Reviews Chemistry 3(9), p. 552-561, Nature Publishing Group, url, doi:10.1038/s41570-019-0120-4